STRINGSTRING
XP_503455.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_503455.1" - YALI0E02332p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_503455.1YALI0E02332p (1028 aa)    
Predicted Functional Partners:
DPB4
YALI0A05401p; DNA polymerase II participates in chromosomal DNA replication (163 aa)
     
  0.939
RVB1
YALI0C21868p; DNA helicase which participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. The SWR1 complex mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. The INO80 complex remodels chromatin by shifting nucleosomes and is involved in DNA repair. Also involved in pre-rRNA processing (By similarity) (453 aa)
     
  0.905
XP_500966.1
YALI0B16258p; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1169 aa)
     
  0.893
XP_503213.1
YALI0D23969p; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1537 aa)
     
  0.888
XP_505476.1
YALI0F15939p (857 aa)
     
  0.875
XP_504988.1
YALI0F04334p (572 aa)
     
  0.875
HAT2
YALI0D26279p; Regulatory subunit of the histone acetylase B (HAT-B) complex. The complex acetylates ’Lys-12’ of histone H4 which is required for telomeric silencing (By similarity) (452 aa)
     
  0.860
XP_500852.1
YALI0B13750p (409 aa)
     
  0.860
XP_499647.1
YALI0A01331p (397 aa)
     
  0.860
XP_502163.2
YALI0C23056p (970 aa)
     
  0.854
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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