STRINGSTRING
XP_503464.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_503464.1" - YALI0E02574p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_503464.1YALI0E02574p (126 aa)    
Predicted Functional Partners:
XP_502273.1
YALI0D01155p (85 aa)
     
  0.937
XP_502814.1
YALI0D14102p (164 aa)
     
  0.862
XP_500227.1
YALI0A19030p (105 aa)
     
  0.759
XP_499769.1
YALI0A04961p (138 aa)
     
  0.755
XP_505089.1
YALI0F06644p (115 aa)
     
  0.741
XP_500866.1
YALI0B14058p (85 aa)
     
  0.740
XP_501981.1
YALI0C18535p (445 aa)
       
      0.593
XP_500785.1
YALI0B12078p (325 aa)
       
      0.579
SUB2
YALI0A11157p; ATP-binding RNA helicase involved in transcription elongation and required for the export of mRNA out of the nucleus. SUB2 plays also a role in pre-mRNA splicing and spliceosome assembly. May be involved in rDNA and telomeric silencing, and maintenance of genome integrity (By similarity) (441 aa)
     
  0.509
FAL1
YALI0F02695p; ATP-dependent RNA helicase involved in 40S ribosomal subunit biogenesis. Required for the processing and cleavage of 35S pre-rRNA at sites A0, A1, and A2, leading to mature 18S rRNA (By similarity) (397 aa)
     
  0.494
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
Server load: low (8%) [HD]