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LOS1 protein (Yarrowia lipolytica) - STRING interaction network
"LOS1" - YALI0E04576p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOS1YALI0E04576p; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Involved in pre- tRNA splicing, probably by affecting the interaction of pre-tRNA with splicing endonuclease (By similarity) (1025 aa)    
Predicted Functional Partners:
GSP1
YALI0F04730p; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (By similarity) (214 aa)
     
  0.970
XP_504122.1
YALI0E18854p (406 aa)
     
 
  0.747
XP_502878.1
YALI0D15840p (1120 aa)
     
  0.724
XP_503499.1
YALI0E03432p (394 aa)
     
 
  0.724
XP_500913.1
YALI0B15081p (269 aa)
     
  0.684
XP_500434.1
YALI0B02706p (535 aa)
     
  0.649
XP_002142996.1
YALI0B01760p (210 aa)
     
 
  0.602
XP_504477.1
YALI0E27698p (749 aa)
       
 
  0.592
XP_504016.1
YALI0E16324p (1040 aa)
     
   
  0.563
PUS1
YALI0C12749p; Formation of pseudouridine at positions 27 and 28 in the anticodon stem and loop of transfer RNAs; at positions 34 and 36 of intron-containing precursor tRNA(Ile) and at position 35 in the intron-containing tRNA(Tyr) (528 aa)
     
 
  0.561
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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