STRINGSTRING
XP_503601.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_503601.1" - YALI0E05797p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_503601.1YALI0E05797p (388 aa)    
Predicted Functional Partners:
XP_500778.1
Ribosome biogenesis protein BRX1 (286 aa)
     
 
  0.997
XP_499741.1
YALI0A03905p (321 aa)
     
 
  0.996
DBP9
YALI0F31493p; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs (544 aa)
     
 
  0.995
XP_500726.1
YALI0B10560p (609 aa)
     
 
  0.995
XP_505404.1
YALI0F14245p (275 aa)
     
 
  0.995
XP_505719.1
YALI0F21725p (506 aa)
     
 
  0.995
SPB1
YALI0D09251p; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit (850 aa)
     
 
  0.994
XP_502725.1
YALI0D12012p (686 aa)
     
 
  0.994
XP_502658.1
YALI0D10505p (685 aa)
     
 
  0.994
NOP58
YALI0B00946p; Required for pre-18S rRNA processing. May bind microtubules (By similarity) (515 aa)
     
 
  0.994
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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