STRINGSTRING
XP_503626.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_503626.1" - YALI0E06435p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_503626.1YALI0E06435p (626 aa)    
Predicted Functional Partners:
XP_501245.1
YALI0B22968p (247 aa)
     
  0.991
XP_505772.1
YALI0F23045p (2017 aa)
     
  0.989
CCR4
YALI0B15147p; Acts as catalytic component of the CCR4-NOT core complex, which in the nucleus seems to be a general transcription factor, and in the cytoplasm the major mRNA deadenylase involved in mRNA turnover. Ccr4 has 3’-5’ RNase activity with a strong preference for polyadenylated substrates and also low exonuclease activity towards single-stranded DNA. Discovered because of its role in the control of ADH2 gene expression. It is required for the expression of genes involved in non-fermentative growth (By similarity) (705 aa)
     
  0.976
XP_500803.1
YALI0B12496p (464 aa)
       
  0.970
XP_504943.1
YALI0F03344p (278 aa)
     
  0.963
XP_504890.1
YALI0F02101p (495 aa)
     
  0.955
XP_501608.1
YALI0C08657p (455 aa)
       
  0.818
XP_501072.1
YALI0B18759p (2052 aa)
     
  0.655
LEA1
YALI0E30569p; Involved in pre-mRNA splicing (230 aa)
     
  0.650
XP_505442.2
YALI0F15081p (731 aa)
     
  0.644
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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