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PMR1 protein (Yarrowia lipolytica) - STRING interaction network
"PMR1" - YALI0E09471p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMR1YALI0E09471p; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. Has a role in the secretory pathway (928 aa)    
Predicted Functional Partners:
XP_503344.1
YALI0D27038p (933 aa)
   
0.667
XP_500433.1
YALI0B02684p (1209 aa)
   
0.667
XP_503334.1
YALI0D26818p (637 aa)
     
 
  0.642
XP_501440.1
YALI0C04411p (569 aa)
     
 
  0.642
XP_501072.1
YALI0B18759p (2052 aa)
   
 
  0.616
XP_502421.2
YALI0D04873p; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium (1254 aa)
   
 
0.582
XP_501118.1
YALI0B19998p (2119 aa)
   
   
  0.566
XPR6
YALI0F13189p (976 aa)
     
 
  0.541
XP_501483.1
YALI0C05665p (256 aa)
       
 
  0.530
XP_500881.1
YALI0B14377p (276 aa)
       
 
  0.530
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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