STRINGSTRING
XP_503892.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_503892.1" - YALI0E13211p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_503892.1YALI0E13211p (180 aa)    
Predicted Functional Partners:
XP_500184.1
YALI0A17985p (649 aa)
     
 
  0.862
SEC62
YALI0B17512p; Required for preprotein translocation (396 aa)
       
 
  0.858
XP_502422.1
YALI0D04895p (197 aa)
     
 
  0.850
SEC61
YALI0E21912p; Appears to play a crucial role in the insertion of secretory and membrane polypeptides into the ER. It is required for assembly of membrane and secretory proteins and is essential for cell growth. It interacts with other membrane proteins required for protein translocation. Upon binding to SEC62/63 complex, secretory precursor polypeptides may engage SEC61 to begin membrane penetration event. A cycle of assembly and disassembly of SEC62/63 from SEC61 may govern the activity of the translocase (By similarity) (471 aa)
       
 
  0.677
XP_501421.1
YALI0C04004p (466 aa)
       
 
  0.582
KAR2
YALI0E13706p; Probably plays a role in facilitating the assembly of multimeric protein complexes inside the ER. Is required for secretory polypeptide translocation. May physically associate with SEC63 protein in the endoplasmic reticulum and this interaction may be regulated by ATP hydrolysis (By similarity) (670 aa)
       
 
  0.565
XP_002143050.1
YALI0D08635p (68 aa)
       
 
  0.553
XP_503158.2
YALI0D22594p (471 aa)
       
 
  0.513
SRP54
YALI0F03839p; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein) (536 aa)
       
 
  0.425
XP_500605.1
YALI0B07425p (189 aa)
     
 
  0.402
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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