STRINGSTRING
XP_503896.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_503896.1" - YALI0E13299p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_503896.1YALI0E13299p (215 aa)    
Predicted Functional Partners:
XP_502914.1
YALI0D16863p (339 aa)
     
      0.863
XP_501069.1
YALI0B18700p (342 aa)
     
      0.863
XP_500756.1
YALI0B11352p (1111 aa)
     
  0.841
XP_501420.1
YALI0C03982p (137 aa)
     
 
  0.721
XP_504210.1
YALI0E20955p; Plays a complex role in regulating the basal catalytic activity of the alpha subunit (280 aa)
       
      0.708
XP_504206.1
YALI0E20867p; Plays a complex role in regulating the basal catalytic activity of the alpha subunit (260 aa)
       
      0.708
PRP28
YALI0F28391p; ATP-dependent RNA helicase involved in mRNA splicing. May destabilize the U1/5’-splice site duplex to permit an effective competition for the 5’-splice site by the U6 snRNA, resulting in the switch between U1 and U6 at the 5’-splice site. May also act to unwind the U4/U6 base-pairing interaction in the U4/U6/U5 snRNP, facilitating the first covalent step of splicing (By similarity) (575 aa)
         
  0.697
XP_500227.1
YALI0A19030p (105 aa)
     
 
  0.690
XP_504413.1
YALI0E26147p (366 aa)
     
 
  0.676
XP_505072.1
YALI0F06292p (203 aa)
     
  0.675
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
Server load: low (6%) [HD]