STRINGSTRING
XP_503927.2 protein (Yarrowia lipolytica) - STRING interaction network
"XP_503927.2" - YALI0E14058p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_503927.2YALI0E14058p (417 aa)    
Predicted Functional Partners:
XP_502448.2
YALI0D05547p (339 aa)
     
  0.813
SUB2
YALI0A11157p; ATP-binding RNA helicase involved in transcription elongation and required for the export of mRNA out of the nucleus. SUB2 plays also a role in pre-mRNA splicing and spliceosome assembly. May be involved in rDNA and telomeric silencing, and maintenance of genome integrity (By similarity) (441 aa)
     
  0.763
XP_504544.2
YALI0E29293p (170 aa)
     
  0.695
XP_500029.1
YALI0A13101p (867 aa)
     
  0.660
XP_500940.1
YALI0B15642p (731 aa)
     
    0.627
XP_503225.1
YALI0D24299p (255 aa)
     
 
  0.622
XP_002142994.1
YALI0A20867p (223 aa)
       
 
  0.618
XP_505488.1
YALI0F16203p (365 aa)
       
      0.609
XP_502167.1
YALI0C23144p; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5’-3’ exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins (1526 aa)
     
 
  0.606
XP_500136.2
YALI0A16588p (1632 aa)
       
 
  0.604
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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