STRINGSTRING
XP_504024.2 protein (Yarrowia lipolytica) - STRING interaction network
"XP_504024.2" - YALI0E16500p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_504024.2YALI0E16500p (184 aa)    
Predicted Functional Partners:
XP_503723.1
YALI0E09174p (253 aa)
   
  0.983
XP_502874.1
YALI0D15752p (474 aa)
     
  0.959
FIP1
YALI0E02882p; Pre-mRNA polyadenylation factor that directly interacts with poly(A) polymerase (221 aa)
     
  0.944
XP_505974.1
YALI0F28039p (518 aa)
     
  0.871
XP_503722.1
YALI0E09152p (327 aa)
     
  0.846
XP_501450.1
YALI0C04620p (919 aa)
     
  0.834
XP_503462.2
YALI0E02530p (120 aa)
   
  0.785
XP_503327.1
YALI0D26664p (194 aa)
     
  0.771
PAB1
YALI0C00539p; Binds the poly(A) tail of mRNA. Appears to be an important mediator of the multiple roles of the poly(A) tail in mRNA biogenesis, stability and translation. In the nucleus, involved in both mRNA cleavage and polyadenylation. Is also required for efficient mRNA export to the cytoplasm. Acts in concert with a poly(A)-specific nuclease (PAN) to affect poly(A) tail shortening, which may occur concomitantly with either nucleocytoplasmic mRNA transport or translational initiation. In the cytoplasm, stimulates translation initiation and regulates mRNA decay through translation t [...] (629 aa)
     
  0.762
RNA14
YALI0D18612p; Component of the cleavage factor IA (CFIA) complex, which is involved in the endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3’-end formation (806 aa)
     
  0.742
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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