STRINGSTRING
XP_504062.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_504062.1" - YALI0E17413p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_504062.1YALI0E17413p; Plays a role in vesicular protein sorting (848 aa)    
Predicted Functional Partners:
XP_503205.1
YALI0D23793p (300 aa)
     
  0.991
XP_504168.1
YALI0E19987p (286 aa)
     
  0.987
SNX3
YALI0F05456p; Required for retention of late Golgi membrane proteins. Component of the retrieval machinery that functions by direct interaction with the cytosolic tails of certain TGN membrane proteins during the sorting/budding process at the prevacuolar compartment. Binds phosphatidylinositol 3-phosphate (PtdIns(P3)) (By similarity) (152 aa)
     
  0.978
XP_500143.1
YALI0A16797p (632 aa)
     
  0.970
XP_503108.1
YALI0D21362p (581 aa)
     
  0.933
XP_503920.2
YALI0E13904p (436 aa)
     
  0.932
SNX41
YALI0D07678p; May be required for cytoplasm to vacuole transport (Cvt) and pexophagy (570 aa)
     
  0.932
MVP1
YALI0A03443p; Required for vacuolar protein sorting (605 aa)
     
  0.932
XP_503576.1
YALI0E05247p (823 aa)
     
 
  0.853
XP_502274.1
YALI0D01177p (485 aa)
     
 
  0.726
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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