STRINGSTRING
XP_504143.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_504143.1" - YALI0E19382p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_504143.1YALI0E19382p (644 aa)    
Predicted Functional Partners:
XP_500347.1
YALI0B00528p (926 aa)
       
  0.838
XP_504334.1
YALI0E24035p (512 aa)
     
  0.834
RPC82
YALI0F08635p; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific core component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs (By similarity) (599 aa)
     
  0.812
XP_501249.1
YALI0B23056p (227 aa)
     
  0.795
XP_503950.1
YALI0E14663p (568 aa)
     
  0.759
XP_503079.1
YALI0D20592p (138 aa)
       
  0.757
XP_502127.1
YALI0C22231p (1394 aa)
       
  0.739
XP_505200.1
YALI0F09295p (282 aa)
       
  0.720
XP_501365.1
YALI0C02563p (324 aa)
     
  0.707
XP_504476.1
YALI0E27676p (140 aa)
         
  0.697
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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