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XP_504149.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_504149.1" - YALI0E19514p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_504149.1YALI0E19514p (849 aa)    
Predicted Functional Partners:
XP_500142.1
YALI0A16775p (144 aa)
       
  0.971
DHH1
YALI0F21032p; ATP-dependent RNA helicase involved in mRNA turnover, and more specifically in mRNA decapping. Is involved in G1/S DNA- damage checkpoint recovery, probably through the regulation of the translational status of a subset of mRNAs. May also have a role in translation and mRNA nuclear export (By similarity) (522 aa)
     
  0.963
XP_002143124.1
YALI0F30426p (165 aa)
       
  0.962
XP_502167.1
YALI0C23144p; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5’-3’ exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins (1526 aa)
     
  0.951
XP_500256.1
YALI0A19756p (131 aa)
       
  0.947
XP_500743.1
YALI0B11022p (94 aa)
       
  0.945
XP_500866.1
YALI0B14058p (85 aa)
       
  0.944
RAT1
YALI0D13750p; Possesses 5’->3’ exoribonuclease activity. Required for the processing of nuclear mRNA and rRNA precursors. May promote termination of transcription by RNA polymerase II (By similarity) (1010 aa)
       
  0.919
XP_500537.1
YALI0B05632p (519 aa)
       
      0.903
XP_504496.1
YALI0E28226p (452 aa)
       
      0.900
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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