STRINGSTRING
XP_504220.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_504220.1" - YALI0E21175p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_504220.1YALI0E21175p (1028 aa)    
Predicted Functional Partners:
XP_500384.1
YALI0B01386p (708 aa)
     
 
  0.515
XP_503283.1
YALI0D25652p (207 aa)
       
 
  0.459
XP_503723.1
YALI0E09174p (253 aa)
           
  0.443
RNA14
YALI0D18612p; Component of the cleavage factor IA (CFIA) complex, which is involved in the endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3’-end formation (806 aa)
           
  0.443
PRP5
YALI0C05368p; ATP-dependent RNA helicase involved spliceosome assembly and in nuclear splicing. Catalyzes an ATP-dependent conformational change of U2 snRNP. Bridges U1 and U2 snRNPs and enables stable U2 snRNP association with intron RNA (By similarity) (974 aa)
           
  0.439
XP_504065.1
YALI0E17479p (256 aa)
           
  0.430
XP_500667.1
YALI0B09053p (1077 aa)
     
   
  0.423
XP_500756.1
YALI0B11352p (1111 aa)
     
   
  0.410
XP_501687.2
YALI0C10648p (2357 aa)
           
  0.407
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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