STRINGSTRING
XP_504230.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_504230.1" - YALI0E21439p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_504230.1YALI0E21439p (420 aa)    
Predicted Functional Partners:
XP_503374.1
YALI0E00506p (961 aa)
       
  0.959
RRI1
YALI0E04829p; Catalytic Component of the COP9 signalosome (CSN) complex that acts as an regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunit of SCF-type E3 ubiquitin-protein ligase complexes (354 aa)
       
  0.756
XP_501912.1
YALI0C16643p (1085 aa)
       
  0.751
XP_503065.1
YALI0D20240p (1115 aa)
     
 
  0.740
XP_506078.1
YALI0F31053p (1869 aa)
       
  0.728
XP_505677.1
YALI0F20746p (785 aa)
     
 
  0.711
XP_500771.1
YALI0B11726p (827 aa)
     
 
  0.710
XP_503336.1
YALI0D26862p (496 aa)
       
  0.707
SYF1
YALI0D00561p; Involved in pre-mRNA splicing and cell cycle progression (736 aa)
       
  0.703
XP_500388.1
YALI0B01474p (277 aa)
         
  0.699
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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