STRINGSTRING
XP_504305.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_504305.1" - YALI0E23342p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_504305.1YALI0E23342p (707 aa)    
Predicted Functional Partners:
XP_002143107.1
YALI0F06826p (90 aa)
       
  0.977
XP_501230.1
YALI0B22638p (159 aa)
     
  0.976
XP_503213.1
YALI0D23969p; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1537 aa)
     
  0.881
XP_501290.1
YALI0C00561p (150 aa)
       
  0.846
XP_502661.1
YALI0D10571p; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
       
 
  0.846
UBC2
YALI0F26697p; Catalyzes the covalent attachment of ubiquitin to other proteins. Plays a role in transcription regulation by catalyzing the monoubiquitination of histone H2B to form H2BK123ub1. H2BK123ub1 gives a specific tag for epigenetic transcriptional activation and is also a prerequisite for H3K4me and H3K79me formation. Also involved in postreplication repair of UV-damaged DNA, in N-end rule-dependent protein degradation and in sporulation (151 aa)
       
  0.802
XP_503549.1
YALI0E04620p (153 aa)
       
  0.797
XP_502855.1
YALI0D15312p (147 aa)
       
  0.797
XP_503100.1
YALI0D21120p (1124 aa)
     
 
  0.768
XP_499982.1
YALI0A11517p (332 aa)
       
 
  0.759
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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