STRINGSTRING
XP_504307.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_504307.1" - YALI0E23386p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_504307.1YALI0E23386p (193 aa)    
Predicted Functional Partners:
XP_506048.1
90S preribosome/SSU processome component KRR1; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (359 aa)
     
  0.898
XP_502109.1
YALI0C21846p (1117 aa)
     
  0.855
XP_503437.1
YALI0E01936p; Involved in nucleolar processing of pre-18S ribosomal RNA (244 aa)
     
 
    0.847
NOP58
YALI0B00946p; Required for pre-18S rRNA processing. May bind microtubules (By similarity) (515 aa)
     
    0.847
XP_500703.1
YALI0B10065p; Involved in nucleolar processing of pre-18S ribosomal RNA (641 aa)
     
  0.842
PNO1
YALI0E01122p; Required for small ribosomal subunit (SSU) synthesis. Has a role in the processing of early nucleolar and late cytoplasmic pre-RNA species (By similarity) (258 aa)
     
  0.841
UTP10
YALI0E29506p; Involved in nucleolar processing of pre-18S ribosomal RNA. Involved in ribosome biosynthesis (By similarity) (1635 aa)
     
  0.833
XP_505660.1
YALI0F20372p (559 aa)
     
 
  0.833
ROK1
YALI0B21538p; ATP-dependent RNA helicase involved in 40S ribosomal subunit biogenesis. Required for the processing and cleavage of 35S pre-rRNA at sites A0, A1, and A2, leading to mature 18S rRNA (547 aa)
     
 
  0.833
XP_505225.1
YALI0F09856p (522 aa)
     
    0.810
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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