STRINGSTRING
XP_504494.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_504494.1" - YALI0E28182p in Yarrowia lipolytica
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_504494.1YALI0E28182p (349 aa)    
Predicted Functional Partners:
XP_502477.1
YALI0D06259p (605 aa)
 
 
0.983
XP_501230.1
YALI0B22638p (159 aa)
     
  0.976
XP_505175.1
ubiquitin-60S ribosomal protein L40 fusion protein (128 aa)
       
  0.975
XP_002143107.1
YALI0F06826p (90 aa)
     
  0.975
UBC12
YALI0D07890p; Accepts the ubiquitin-like protein NEDD8/RUB1 from the UBA3-ULA1 E1 complex and catalyzes its covalent attachment to other proteins (179 aa)
     
  0.941
XP_002143115.1
YALI0F18403p (77 aa)
     
  0.809
UBC2
YALI0F26697p; Catalyzes the covalent attachment of ubiquitin to other proteins. Plays a role in transcription regulation by catalyzing the monoubiquitination of histone H2B to form H2BK123ub1. H2BK123ub1 gives a specific tag for epigenetic transcriptional activation and is also a prerequisite for H3K4me and H3K79me formation. Also involved in postreplication repair of UV-damaged DNA, in N-end rule-dependent protein degradation and in sporulation (151 aa)
       
  0.792
XP_504128.2
YALI0E18986p (457 aa)
       
  0.772
XP_504909.1
YALI0F02563p (210 aa)
       
  0.771
ATG3
YALI0E24453p; E2 conjugating enzyme required for the cytoplasm to vacuole transport (Cvt) and autophagy. Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria to a basal level to fulfill cellular energy requirements and preventing excess ROS production. Responsible for the E2-like covalent binding of phosphatidylethanolamine to the C-terminal Gly of ATG8. The ATG12- ATG5 conjugate plays a role of an E3 and promotes the transfer of ATG8 from ATG3 [...] (366 aa)
     
  0.767
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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