STRINGSTRING
XP_504527.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_504527.1" - YALI0E28897p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_504527.1YALI0E28897p (136 aa)    
Predicted Functional Partners:
SPT5
YALI0C11561p; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (By similarity) (980 aa)
       
 
  0.619
XP_500866.1
YALI0B14058p (85 aa)
     
        0.480
XP_501249.1
YALI0B23056p (227 aa)
       
 
  0.477
XP_501365.1
YALI0C02563p (324 aa)
       
 
  0.473
SSU72
YALI0F18194p; Processively dephosphorylates Ser-5 of the heptad repeats YSPTSPS in the C-terminal domain of the largest RNA polymerase II subunit (RPB1) (193 aa)
       
 
  0.443
XP_503802.1
YALI0E10989p (345 aa)
       
      0.440
CYM1
YALI0F21615p; ATP-independent protease that degrades mitochondrial transit peptides after their cleavage. Also degrades other unstructured peptides (By similarity) (990 aa)
       
      0.422
XP_502245.1
YALI0D00539p (545 aa)
       
      0.410
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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