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XP_504572.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_504572.1" - YALI0E29931p in Yarrowia lipolytica
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_504572.1YALI0E29931p (839 aa)    
Predicted Functional Partners:
CFT1
YALI0E03982p; RNA-binding component of the cleavage and polyadenylation factor (CPF) complex, which plays a key role in polyadenylation-dependent pre-mRNA 3’-end formation and cooperates with cleavage factors including the CFIA complex and NAB4/CFIB. Involved in poly(A) site recognition. May be involved in coupling transcription termination and mRNA 3’-end formation (By similarity) (1269 aa)
     
  0.896
XP_505974.1
YALI0F28039p (518 aa)
     
  0.832
LIG4
YALI0D21384p; Involved in ds DNA break repair. Has a role in non- homologous integration (NHI) pathways where it is required in the final step of non-homologus end-joining (By similarity) (956 aa)
   
  0.804
XP_500889.1
YALI0B14553p (701 aa)
     
  0.788
RNA14
YALI0D18612p; Component of the cleavage factor IA (CFIA) complex, which is involved in the endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3’-end formation (806 aa)
     
  0.764
FIP1
YALI0E02882p; Pre-mRNA polyadenylation factor that directly interacts with poly(A) polymerase (221 aa)
     
  0.752
XP_505417.1
YALI0F14531p (367 aa)
       
  0.743
YTH1
YALI0D14982p; Component of the cleavage factor I (CF I) involved in pre-mRNA 3’-end processing (193 aa)
       
  0.743
XP_500805.1
YALI0B12540p (388 aa)
       
  0.743
KU80
YALI0E02068p; Single-stranded DNA-dependent ATP-dependent helicase. Involved in non-homologous end joining (NHEJ) DNA double strand break repair. DNA-binding is sequence-independent but has a high affinity to nicks in double-stranded DNA and to the ends of duplex DNA. Binds to naturally occurring chromosomal ends, and therefore provides chromosomal end protection. Required also for telomere recombination to repair telomeric ends in the absence of telomerase. KU70, of the KU70/KU80 heterodimer, binds to the stem loop of TLC1, the RNA component of telomerase. Involved in telomere mainten [...] (726 aa)
     
  0.741
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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