STRINGSTRING
XP_504609.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_504609.1" - YALI0E30877p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_504609.1YALI0E30877p (452 aa)    
Predicted Functional Partners:
XP_500756.1
YALI0B11352p (1111 aa)
     
  0.964
TIF1
YALI0B20922p; ATP-dependent RNA helicase which is a subunit of the eIF4F complex involved in cap recognition and is required for mRNA binding to ribosome. In the current model of translation initiation, eIF4A unwinds RNA secondary structures in the 5’-UTR of mRNAs which is necessary to allow efficient binding of the small ribosomal subunit, and subsequent scanning for the initiator codon (By similarity) (395 aa)
   
  0.962
XP_506031.1
YALI0F30019p (1317 aa)
   
 
  0.906
PRP45
YALI0C11715p; Involved in pre-mRNA splicing (568 aa)
     
  0.859
XP_503754.1
YALI0E09889p (601 aa)
       
  0.847
XP_501420.1
YALI0C03982p (137 aa)
     
  0.844
XP_503802.1
YALI0E10989p (345 aa)
     
  0.843
XP_503188.1
YALI0D23375p (146 aa)
     
  0.834
XP_503112.1
YALI0D21450p (226 aa)
     
  0.834
XP_503358.1
YALI0D27346p (491 aa)
       
  0.833
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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