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DBP5 protein (Yarrowia lipolytica) - STRING interaction network
"DBP5" - YALI0E31427p in Yarrowia lipolytica
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DBP5YALI0E31427p; ATP-dependent RNA helicase associated with the nuclear pore complex and essential for mRNA export from the nucleus. May participate in a terminal step of mRNA export through the removal of proteins that accompany mRNA through the nucleopore complex. May also be involved in early transcription (By similarity) (488 aa)    
Predicted Functional Partners:
XP_500403.1
YALI0B01870p (619 aa)
     
 
  0.951
XP_500185.1
YALI0A18007p (531 aa)
     
 
  0.920
CWC2
YALI0F29073p; Involved in the first step of pre-mRNA splicing. Required for cell growth and cell cycle control. Plays a role in the levels of the U1, U4, U5 and U6 snRNAs and the maintenance of the U4/U6 snRNA complex. May provide the link between the "nineteen complex" NTC spliceosome protein complex and the spliceosome through the U6 snRNA. Associates predominantly with U6 snRNAs in assembled active spliceosomes. Binds directly to the internal stem-loop (ISL) domain of the U6 snRNA and to the pre- mRNA intron near the 5’ splice site during the activation and catalytic phases of the s [...] (382 aa)
     
 
  0.906
XP_505234.2
YALI0F10098p (1080 aa)
     
 
  0.843
XP_002142994.1
YALI0A20867p (223 aa)
     
 
  0.841
XP_505962.1
YALI0F27775p (1182 aa)
     
 
  0.774
XP_505140.1
YALI0F07909p (221 aa)
     
 
  0.732
XP_502960.1
YALI0D17886p (1272 aa)
     
 
  0.576
XP_500039.1
YALI0A13519p (1247 aa)
     
 
  0.534
XP_499995.2
YALI0A11869p (1260 aa)
     
 
  0.534
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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