STRINGSTRING
XP_504641.2 protein (Yarrowia lipolytica) - STRING interaction network
"XP_504641.2" - YALI0E31551p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_504641.2YALI0E31551p (763 aa)    
Predicted Functional Partners:
XP_503737.1
YALI0E09493p (2186 aa)
   
 
  0.929
XP_505175.1
ubiquitin-60S ribosomal protein L40 fusion protein (128 aa)
     
  0.856
XP_503213.1
YALI0D23969p; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1537 aa)
   
  0.817
PRP45
YALI0C11715p; Involved in pre-mRNA splicing (568 aa)
     
  0.759
CLF1
YALI0F18392p; Involved in pre-mRNA splicing and cell cycle progression. Required for the spliceosome assembly and initiation of the DNA replication (By similarity) (676 aa)
     
  0.745
XP_501072.1
YALI0B18759p (2052 aa)
     
  0.730
XP_002143107.1
YALI0F06826p (90 aa)
     
  0.723
XP_501420.1
YALI0C03982p (137 aa)
     
  0.720
GSP1
YALI0F04730p; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (By similarity) (214 aa)
     
  0.715
XP_501048.1
YALI0B18238p (147 aa)
     
  0.707
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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