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XP_504653.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_504653.1" - YALI0E31779p in Yarrowia lipolytica
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_504653.1YALI0E31779p (689 aa)    
Predicted Functional Partners:
XP_503142.1
YALI0D22220p (264 aa)
   
   
  0.695
XP_503401.1
YALI0E01100p (509 aa)
     
      0.568
XP_502288.1
YALI0D01485p; S-adenosyl-L-methionine-dependent transferase that acts as a component of the wybutosine biosynthesis pathway. Wybutosine is a hyper modified guanosine with a tricyclic base found at the 3’-position adjacent to the anticodon of eukaryotic phenylalanine tRNA. Catalyzes the transfer of the alpha-amino-alpha- carboxypropyl (acp) group from S-adenosyl-L-methionine to the C-7 position of 4-demethylwyosine (imG-14) to produce wybutosine-86 (401 aa)
     
   
  0.536
TRM5
YALI0D05489p; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5’ of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding (508 aa)
     
   
  0.535
XP_500966.1
YALI0B16258p; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1169 aa)
     
   
  0.521
DRS1
YALI0B16896p; ATP-binding RNA helicase involved in ribosome assembly (753 aa)
     
      0.519
ERB1
YALI0E26389p; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (820 aa)
     
   
  0.517
XP_501337.1
YALI0C01716p (370 aa)
       
    0.508
XP_504410.1
YALI0E26059p; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs (359 aa)
   
   
  0.502
XP_501185.1
YALI0B21516p (423 aa)
   
   
  0.490
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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