STRINGSTRING
XP_504670.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_504670.1" - YALI0E32109p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_504670.1YALI0E32109p (1090 aa)    
Predicted Functional Partners:
XP_500063.1
YALI0A14586p (635 aa)
     
  0.964
XP_505413.1
YALI0F14443p (463 aa)
     
  0.964
XP_501641.1
YALI0C09438p (526 aa)
       
  0.962
XP_504295.1
YALI0E23133p (186 aa)
     
  0.962
XP_501470.1
YALI0C05346p (482 aa)
     
  0.961
XP_504089.1
YALI0E18051p (271 aa)
       
  0.960
XP_500875.1
YALI0B14245p (741 aa)
     
  0.959
XP_501393.1
YALI0C03333p (652 aa)
     
  0.958
HHT1
YALI0F25905p; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (By similarity) (139 aa)
       
  0.957
CSE4
YALI0B13508p; Histone H3-like variant which exclusively replaces conventional H3 in the nucleosome core of centromeric chromatin at the inner plate of the kinetochore. Required for recruitment and assembly of kinetochore proteins, mitotic progression and chromosome segregation. May serve as an epigenetic mark that propagates centromere identity through replication and cell division (By similarity) (150 aa)
       
  0.957
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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