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NDE1 protein (Yarrowia lipolytica) - STRING interaction network
"NDE1" - YALI0E32571p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NDE1YALI0E32571p; Required for nuclear migration (461 aa)    
Predicted Functional Partners:
XP_500289.1
YALI0A20504p (941 aa)
       
  0.825
LIS1
YALI0B00902p; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. Plays a central role in positioning the mitotic spindle at the bud neck during cell division. Targets cytoplasmic dynein to microtubule plus ends, thereby promoting dynein-mediated microtubule sliding along the bud cortex and consequently the movement of the mitotic spindle to the bud neck (437 aa)
       
  0.708
XP_501914.1
YALI0C16687p (173 aa)
         
  0.700
XP_504704.1
YALI0E32857p (3982 aa)
     
  0.642
XP_501031.1
YALI0B17798p (624 aa)
       
  0.601
NDC80
YALI0B11814p; Acts as a component of the essential kinetochore- associated NDC80 complex, which is required for chromosome segregation and spindle checkpoint activity (631 aa)
     
  0.570
XP_500643.1
YALI0B08470p (543 aa)
       
    0.559
XP_501253.1
YALI0B23144p (415 aa)
     
  0.539
XP_503912.1
YALI0E13684p (210 aa)
         
  0.534
XP_503664.1
YALI0E07491p (788 aa)
         
  0.534
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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