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XP_504719.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_504719.1" - YALI0E33231p in Yarrowia lipolytica
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_504719.1YALI0E33231p (421 aa)    
Predicted Functional Partners:
XP_502376.1
YALI0D03718p; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1229 aa)
     
  0.954
XP_501909.2
YALI0C16566p; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1750 aa)
       
  0.946
RAI1
YALI0E28490p; Ribonuclease that specifically degrades pre-mRNAs with a defective 5’ end cap and is part of a pre-mRNA capping quality control. Has decapping and pyrophosphohydrolase activities. Has decapping activity toward incomplete 5’ end cap mRNAs such as unmethylated 5’ end-capped RNA to release GpppN and 5’ end monophosphate RNA. Also possesses RNA 5’-pyrophosphohydrolase activity by hydrolyzing the 5’ end triphosphate to release pyrophosphates (By similarity) (349 aa)
     
 
  0.935
RAT1
YALI0D13750p; Possesses 5’->3’ exoribonuclease activity. Required for the processing of nuclear mRNA and rRNA precursors. May promote termination of transcription by RNA polymerase II (By similarity) (1010 aa)
     
 
  0.855
XP_501225.1
YALI0B22528p (867 aa)
     
  0.786
XP_505388.1
YALI0F13783p; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1628 aa)
       
  0.753
XP_502142.1
YALI0C22550p; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1483 aa)
       
  0.753
XP_501775.1
YALI0C12793p (178 aa)
       
  0.753
XP_505038.1
YALI0F05566p (314 aa)
     
  0.744
RPB5
YALI0D06457p; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non-coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. Pol II is the central component of the basal RNA polymerase II transcription machinery. Pols are composed of mobile elements that move relative to each other. In Pol II, RPB5 is part of the lower jaw surrounding the central large cleft and tho [...] (212 aa)
     
  0.740
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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