STRINGSTRING
XP_504788.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_504788.1" - YALI0E34815p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_504788.1YALI0E34815p (1016 aa)    
Predicted Functional Partners:
XP_504903.1
YALI0F02387p (1906 aa)
     
 
  0.454
SEC23
YALI0E16995p; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules (By similarity) (758 aa)
     
 
  0.452
XP_503201.1
YALI0D23705p (750 aa)
     
 
  0.452
XP_505989.1
YALI0F28413p (473 aa)
           
  0.442
XP_503567.1
YALI0E05049p (314 aa)
           
  0.442
XP_500395.1
YALI0B01672p (429 aa)
           
  0.442
FIP1
YALI0E02882p; Pre-mRNA polyadenylation factor that directly interacts with poly(A) polymerase (221 aa)
           
  0.441
SEC31
YALI0E30635p; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules (By similarity) (1184 aa)
     
 
  0.439
SEC24
YALI0F05324p; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules (By similarity) (934 aa)
     
 
  0.431
XP_503926.1
YALI0E14036p (906 aa)
     
 
  0.431
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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