STRINGSTRING
XP_504829.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_504829.1" - YALI0F00660p in Yarrowia lipolytica
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_504829.1YALI0F00660p (364 aa)    
Predicted Functional Partners:
XP_501149.1
YALI0B20724p (1158 aa)
     
 
  0.938
CLF1
YALI0F18392p; Involved in pre-mRNA splicing and cell cycle progression. Required for the spliceosome assembly and initiation of the DNA replication (By similarity) (676 aa)
     
 
  0.781
XP_503283.1
YALI0D25652p (207 aa)
       
 
  0.739
XP_505210.1
YALI0F09493p (548 aa)
     
 
  0.689
RSE1
YALI0D02717p; Involved in pre-mRNA splicing (1143 aa)
       
 
  0.613
XP_503754.1
YALI0E09889p (601 aa)
       
 
  0.604
PRP5
YALI0C05368p; ATP-dependent RNA helicase involved spliceosome assembly and in nuclear splicing. Catalyzes an ATP-dependent conformational change of U2 snRNP. Bridges U1 and U2 snRNPs and enables stable U2 snRNP association with intron RNA (By similarity) (974 aa)
     
 
  0.498
XP_500756.1
YALI0B11352p (1111 aa)
     
 
  0.494
XP_502449.2
YALI0D05577p (585 aa)
     
   
  0.468
BBP
YALI0F18370p; Necessary for the splicing of pre-mRNA. Has a role in the recognition of the branch site (5’-UACUAAC-3’), the pyrimidine tract and the 3’-splice site at the 3’-end of introns (By similarity) (605 aa)
     
   
  0.458
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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