STRINGSTRING
XP_504912.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_504912.1" - YALI0F02629p in Yarrowia lipolytica
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_504912.1YALI0F02629p (453 aa)    
Predicted Functional Partners:
XP_503737.1
YALI0E09493p (2186 aa)
   
 
  0.959
CWC2
YALI0F29073p; Involved in the first step of pre-mRNA splicing. Required for cell growth and cell cycle control. Plays a role in the levels of the U1, U4, U5 and U6 snRNAs and the maintenance of the U4/U6 snRNA complex. May provide the link between the "nineteen complex" NTC spliceosome protein complex and the spliceosome through the U6 snRNA. Associates predominantly with U6 snRNAs in assembled active spliceosomes. Binds directly to the internal stem-loop (ISL) domain of the U6 snRNA and to the pre- mRNA intron near the 5’ splice site during the activation and catalytic phases of the s [...] (382 aa)
       
      0.898
XP_503947.1
YALI0E14597p (656 aa)
     
   
  0.869
XP_500550.1
YALI0B05918p (470 aa)
   
 
0.847
XP_505278.1
YALI0F11231p (755 aa)
   
 
  0.821
XP_506064.1
YALI0F30745p (1006 aa)
   
 
  0.787
XP_503399.1
YALI0E01056p (937 aa)
   
 
  0.787
ARO1
YALI0F12639p; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis (1556 aa)
   
   
  0.731
XP_503213.1
YALI0D23969p; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1537 aa)
   
   
  0.728
XP_501981.1
YALI0C18535p (445 aa)
     
   
  0.697
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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