STRINGSTRING
XP_504943.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_504943.1" - YALI0F03344p in Yarrowia lipolytica
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_504943.1YALI0F03344p (278 aa)    
Predicted Functional Partners:
XP_505772.1
YALI0F23045p (2017 aa)
     
  0.990
CCR4
YALI0B15147p; Acts as catalytic component of the CCR4-NOT core complex, which in the nucleus seems to be a general transcription factor, and in the cytoplasm the major mRNA deadenylase involved in mRNA turnover. Ccr4 has 3’-5’ RNase activity with a strong preference for polyadenylated substrates and also low exonuclease activity towards single-stranded DNA. Discovered because of its role in the control of ADH2 gene expression. It is required for the expression of genes involved in non-fermentative growth (By similarity) (705 aa)
     
  0.978
XP_500803.1
YALI0B12496p (464 aa)
     
  0.973
XP_503626.1
YALI0E06435p (626 aa)
     
  0.963
XP_501245.1
YALI0B22968p (247 aa)
     
  0.935
XP_504890.1
YALI0F02101p (495 aa)
     
  0.800
XP_503155.1
YALI0D22520p (2031 aa)
     
      0.763
XP_502344.1
YALI0D02871p (473 aa)
       
 
  0.762
XP_505432.1
YALI0F14861p; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (217 aa)
       
      0.756
XP_503474.1
YALI0E02794p (253 aa)
       
      0.756
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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