STRINGSTRING
XP_505115.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_505115.1" - YALI0F07315p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_505115.1YALI0F07315p (361 aa)    
Predicted Functional Partners:
XP_505237.1
YALI0F10153p (410 aa)
     
      0.820
XP_499726.1
YALI0A03509p (701 aa)
     
        0.719
IMP4
YALI0D23859p; Component of the U3 small nucleolar ribonucleoprotein. Required for the early cleavages at sites A0, A1 and A2 during 18S ribosomal pre-RNA processing (By similarity) (283 aa)
     
        0.675
XP_501895.1
YALI0C16203p (507 aa)
     
        0.663
YTM1
YALI0B12320p; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (511 aa)
     
        0.655
XP_505532.1
YALI0F17358p (653 aa)
     
        0.637
XP_500001.1
YALI0A12067p (206 aa)
     
        0.620
DBP3
YALI0D09449p; ATP-dependent RNA helicase required for 60S ribosomal subunit synthesis. Involved in efficient pre-rRNA processing, predominantly at site A3, which is necessary for the normal formation of 25S and 5.8S rRNAs (By similarity) (532 aa)
     
   
  0.609
XP_504014.1
YALI0E16280p (649 aa)
     
        0.555
XP_503401.1
YALI0E01100p (509 aa)
     
   
  0.543
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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