STRINGSTRING
XP_505127.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_505127.1" - YALI0F07623p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_505127.1YALI0F07623p (446 aa)    
Predicted Functional Partners:
FEN1
YALI0F20042p; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a genome [...] (389 aa)
   
   
  0.503
XP_504276.1
YALI0E22671p (677 aa)
   
   
  0.503
XP_503925.1
YALI0E14014p (546 aa)
   
   
  0.503
XP_503065.1
YALI0D20240p (1115 aa)
   
   
  0.503
XP_505619.1
YALI0F19404p (1046 aa)
   
   
  0.493
XP_505852.1
YALI0F25047p (329 aa)
     
 
  0.489
XP_504681.1
YALI0E32351p (319 aa)
     
 
  0.489
XP_500845.1
YALI0B13552p (496 aa)
     
 
  0.489
XP_500361.1
YALI0B00836p (370 aa)
     
 
  0.489
XP_503213.1
YALI0D23969p; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1537 aa)
     
 
  0.476
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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