STRINGSTRING
XP_505204.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_505204.1" - YALI0F09383p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_505204.1YALI0F09383p (139 aa)    
Predicted Functional Partners:
RPB5
YALI0D06457p; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non-coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. Pol II is the central component of the basal RNA polymerase II transcription machinery. Pols are composed of mobile elements that move relative to each other. In Pol II, RPB5 is part of the lower jaw surrounding the central large cleft and tho [...] (212 aa)
     
  0.994
XP_503309.1
YALI0D26301p (117 aa)
     
  0.993
XP_505017.1
YALI0F05082p (152 aa)
     
  0.993
XP_504476.1
YALI0E27676p (140 aa)
     
  0.992
XP_002143005.1
YALI0B04851p (105 aa)
     
  0.992
XP_502037.2
YALI0C20075p (73 aa)
     
  0.992
XP_002143054.1
YALI0D11627p (190 aa)
     
  0.991
XP_505540.1
YALI0F17534p; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (100 aa)
     
  0.991
XP_505038.1
YALI0F05566p (314 aa)
     
  0.991
XP_501775.1
YALI0C12793p (178 aa)
     
  0.991
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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