STRINGSTRING
XP_505229.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_505229.1" - YALI0F09988p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_505229.1YALI0F09988p (317 aa)    
Predicted Functional Partners:
XP_505969.1
YALI0F27929p (109 aa)
       
      0.577
XP_504030.1
YALI0E16621p (524 aa)
       
 
  0.468
ADE1
YALI0F21010p (788 aa)
         
  0.454
XP_500110.1
YALI0A15950p (855 aa)
     
   
  0.449
XP_499784.1
YALI0A05379p (786 aa)
         
  0.447
XP_500331.1
YALI0A21417p (356 aa)
       
      0.445
XP_503737.1
YALI0E09493p (2186 aa)
         
  0.443
XP_505177.1
YALI0F08789p (1229 aa)
     
 
  0.436
XP_502087.1
YALI0C21340p (1129 aa)
     
 
  0.436
UBA4
YALI0C18095p; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Acts by mediating the C-terminal thiocarboxylation of sulfur carrier URM1. Its N-terminus first activates URM1 as acyl- adenylate (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 to form thiocarboxylation (-COSH) of its C-terminus. The reaction probably involves hydrogen sulfide that is generated from the persulfide intermediate and that acts as nucleophile towards URM1. Subsequently, a transient disulfide bond [...] (396 aa)
   
   
  0.433
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
Server load: low (2%) [HD]