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XP_505338.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_505338.1" - YALI0F12661p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_505338.1YALI0F12661p (447 aa)    
Predicted Functional Partners:
NOP7
YALI0B23342p; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (590 aa)
     
 
  0.969
XP_505719.1
YALI0F21725p (506 aa)
     
   
  0.959
XP_499741.1
YALI0A03905p (321 aa)
     
 
  0.948
XP_503601.1
YALI0E05797p (388 aa)
     
 
  0.948
DBP9
YALI0F31493p; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs (544 aa)
     
      0.945
XP_499726.1
YALI0A03509p (701 aa)
     
 
  0.945
XP_503466.1
YALI0E02618p (700 aa)
     
        0.942
XP_500001.1
YALI0A12067p (206 aa)
     
        0.942
XP_504766.1
Ribosome biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (180 aa)
     
 
  0.910
YTM1
YALI0B12320p; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (511 aa)
     
 
  0.845
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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