STRINGSTRING
XP_505366.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_505366.1" - YALI0F13277p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_505366.1YALI0F13277p (1134 aa)    
Predicted Functional Partners:
XP_504450.1
YALI0E27049p (1425 aa)
     
 
  0.664
XP_503903.1
YALI0E13486p (485 aa)
     
      0.587
XP_506064.1
YALI0F30745p (1006 aa)
       
      0.582
XP_503399.1
YALI0E01056p (937 aa)
       
      0.582
XP_504496.1
YALI0E28226p (452 aa)
       
      0.561
XP_505365.1
YALI0F13255p (189 aa)
 
 
        0.540
XP_501446.1
YALI0C04543p (614 aa)
     
 
  0.502
XP_504649.1
YALI0E31691p (274 aa)
       
 
  0.471
HAS1
YALI0E01782p; ATP-dependent RNA helicase involved in 40S ribosomal subunit biogenesis. Required for the processing and cleavage of 35S pre-rRNA at sites A0, A1, and A2, leading to mature 18S rRNA (605 aa)
       
 
  0.465
DBP4
YALI0A20328p; ATP-dependent RNA helicase required for ribosome biogenesis. Involved in the release of U14 snoRNA in pre-ribosomal complexes. Required for pre-rRNA cleavage at site A2 (By similarity) (740 aa)
       
 
  0.465
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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