STRINGSTRING
XP_505375.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_505375.1" - YALI0F13475p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_505375.1YALI0F13475p (422 aa)    
Predicted Functional Partners:
XP_505404.1
YALI0F14245p (275 aa)
     
      0.818
DBP2
YALI0E27715p; ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing (552 aa)
     
 
  0.779
XP_501884.1
rRNA methyltransferase NOP1 (321 aa)
     
 
  0.775
DBP3
YALI0D09449p; ATP-dependent RNA helicase required for 60S ribosomal subunit synthesis. Involved in efficient pre-rRNA processing, predominantly at site A3, which is necessary for the normal formation of 25S and 5.8S rRNAs (By similarity) (532 aa)
     
 
  0.760
XP_503903.1
YALI0E13486p (485 aa)
     
 
  0.739
XP_500940.1
YALI0B15642p (731 aa)
     
      0.700
NOP58
YALI0B00946p; Required for pre-18S rRNA processing. May bind microtubules (By similarity) (515 aa)
     
 
  0.686
XP_500368.1
YALI0B00990p; Involved in the biogenesis of the 60S ribosomal subunit (641 aa)
     
        0.681
XP_502927.1
YALI0D17116p (510 aa)
     
 
  0.658
XP_503115.1
YALI0D21530p (526 aa)
     
      0.643
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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