STRINGSTRING
XP_505485.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_505485.1" - YALI0F16137p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_505485.1YALI0F16137p (372 aa)    
Predicted Functional Partners:
XP_505120.1
YALI0F07469p (252 aa)
       
      0.886
XP_505073.1
YALI0F06314p (251 aa)
       
      0.886
XP_503912.1
YALI0E13684p (210 aa)
       
      0.886
XP_503474.1
YALI0E02794p (253 aa)
       
      0.886
XP_501939.2
YALI0C17325p (290 aa)
       
      0.886
SSN3
YALI0C10967p; Component of the srb8-11 complex. The srb8-11 complex is a regulatory module of the Mediator complex which is itself dependent transcription. The srb8-11 complex may be involved in the transcriptional repression of a subset of genes regulated by Mediator. It may inhibit the association of the Mediator complex with RNA polymerase II to form the holoenzyme complex. The srb8-11 complex phosphorylates the C-terminal domain (CTD) of the largest subunit of RNA polymerase II (By similarity) (405 aa)
       
      0.886
XP_501500.1
YALI0C06039p (244 aa)
       
      0.886
XP_500876.1
YALI0B14267p (249 aa)
       
      0.886
XP_502295.1
YALI0D01628p (649 aa)
     
      0.734
XP_500898.1
YALI0B14751p (1023 aa)
     
  0.713
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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