STRINGSTRING
XP_505539.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_505539.1" - Mitochondrial 54S ribosomal protein YmL38/YmL34 in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_505539.1Mitochondrial 54S ribosomal protein YmL38/YmL34 (129 aa)    
Predicted Functional Partners:
XP_504222.1
60S ribosomal protein L26 (128 aa)
   
  0.998
XP_504264.1
60S ribosomal protein L5 (296 aa)
   
  0.997
XP_505871.1
60S ribosomal protein L25 (141 aa)
   
  0.997
XP_501165.1
60S ribosomal protein L28 (149 aa)
   
  0.997
XP_499925.1
60S ribosomal protein L35 (123 aa)
   
  0.997
XP_502776.1
60S ribosomal protein L10 (221 aa)
   
  0.997
XP_502752.1
Mitochondrial 54S ribosomal protein RML2 (423 aa)
 
  0.997
XP_500404.1
YALI0B01892p (297 aa)
 
  0.997
XP_500914.2
60S ribosomal protein L11 (172 aa)
   
  0.997
RPL17
60S ribosomal protein L17 (184 aa)
   
  0.997
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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