STRINGSTRING
XP_505544.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_505544.1" - YALI0F17622p in Yarrowia lipolytica
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_505544.1YALI0F17622p (418 aa)    
Predicted Functional Partners:
XP_499726.1
YALI0A03509p (701 aa)
     
   
  0.810
XP_503437.1
YALI0E01936p; Involved in nucleolar processing of pre-18S ribosomal RNA (244 aa)
     
      0.791
DBP9
YALI0F31493p; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs (544 aa)
     
   
  0.782
XP_499741.1
YALI0A03905p (321 aa)
     
        0.778
NOP7
YALI0B23342p; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (590 aa)
     
        0.767
XP_502584.1
YALI0D08668p (292 aa)
     
        0.765
XP_503601.1
YALI0E05797p (388 aa)
     
        0.758
XP_505660.1
YALI0F20372p (559 aa)
     
        0.756
DBP3
YALI0D09449p; ATP-dependent RNA helicase required for 60S ribosomal subunit synthesis. Involved in efficient pre-rRNA processing, predominantly at site A3, which is necessary for the normal formation of 25S and 5.8S rRNAs (By similarity) (532 aa)
     
      0.735
XP_505719.1
YALI0F21725p (506 aa)
     
      0.727
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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