STRINGSTRING
XP_505546.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_505546.1" - YALI0F17666p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_505546.1YALI0F17666p (748 aa)    
Predicted Functional Partners:
XP_502353.1
YALI0D03113p (674 aa)
     
  0.977
XP_505497.1
YALI0F16467p (599 aa)
     
  0.977
XP_505488.1
YALI0F16203p (365 aa)
     
  0.971
XP_505026.1
YALI0F05280p (371 aa)
       
 
  0.832
XP_503071.2
YALI0D20416p (590 aa)
     
  0.811
XP_504547.1
YALI0E29337p (579 aa)
     
  0.774
XP_505605.1
YALI0F19074p; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (952 aa)
     
  0.771
XP_504948.1
YALI0F03454p; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (923 aa)
     
  0.763
XP_504903.1
YALI0F02387p (1906 aa)
     
  0.740
XP_501920.1
YALI0C16819p (306 aa)
     
  0.733
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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