STRINGSTRING
XP_505566.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_505566.1" - YALI0F18172p in Yarrowia lipolytica
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_505566.1YALI0F18172p (638 aa)    
Predicted Functional Partners:
XP_504264.1
60S ribosomal protein L5 (296 aa)
       
      0.871
ARX1
YALI0C05599p; Probable metalloprotease involved in proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit. Accompanies the pre-60S particles to the cytoplasm (By similarity) (484 aa)
     
        0.773
XP_503884.1
YALI0E13035p (379 aa)
     
        0.760
XP_505532.1
YALI0F17358p (653 aa)
     
        0.697
DBP3
YALI0D09449p; ATP-dependent RNA helicase required for 60S ribosomal subunit synthesis. Involved in efficient pre-rRNA processing, predominantly at site A3, which is necessary for the normal formation of 25S and 5.8S rRNAs (By similarity) (532 aa)
     
        0.661
XP_500778.1
Ribosome biogenesis protein BRX1 (286 aa)
     
        0.657
XP_500372.1
YALI0B01078p (906 aa)
     
        0.615
XP_502725.1
YALI0D12012p (686 aa)
     
        0.609
XP_503764.1
YALI0E10109p (452 aa)
     
        0.549
XP_500509.1
YALI0B04862p (865 aa)
     
        0.524
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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