STRINGSTRING
XP_505664.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_505664.1" - YALI0F20460p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_505664.1YALI0F20460p (633 aa)    
Predicted Functional Partners:
XP_500756.1
YALI0B11352p (1111 aa)
     
  0.968
PRP46
YALI0E04697p; Involved in pre-mRNA splicing and required for cell cycle progression at G2/M (441 aa)
     
  0.906
XP_501420.1
YALI0C03982p (137 aa)
     
  0.891
XP_501888.1
YALI0C16005p (197 aa)
       
  0.884
XP_501687.2
YALI0C10648p (2357 aa)
     
  0.882
CLF1
YALI0F18392p; Involved in pre-mRNA splicing and cell cycle progression. Required for the spliceosome assembly and initiation of the DNA replication (By similarity) (676 aa)
     
  0.881
XP_501149.1
YALI0B20724p (1158 aa)
     
  0.873
PRP45
YALI0C11715p; Involved in pre-mRNA splicing (568 aa)
     
  0.864
XP_501072.1
YALI0B18759p (2052 aa)
     
  0.860
SYF1
YALI0D00561p; Involved in pre-mRNA splicing and cell cycle progression (736 aa)
     
  0.856
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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