STRINGSTRING
XP_505686.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_505686.1" - YALI0F20944p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_505686.1YALI0F20944p (402 aa)    
Predicted Functional Partners:
XP_502807.2
60S ribosomal protein L12 (165 aa)
       
 
  0.567
XP_505975.1
YALI0F28061p (454 aa)
       
 
  0.478
BCP1
YALI0D27324p; Involved in nuclear export, actin cytoskeleton organization and vesicular transport (302 aa)
       
 
  0.461
RMT2
YALI0C14718p; S-adenosyl-L-methionine-dependent protein-arginine N- methyltransferase that methylates the delta-nitrogen atom of arginine residues to form N5-methylarginine (type IV) in target proteins. Monomethylates ribosomal protein L12 (475 aa)
     
   
  0.450
XP_503895.1
YALI0E13277p (1056 aa)
     
      0.447
XP_500490.1
YALI0B04334p (1102 aa)
     
      0.447
RPL44
60S ribosomal protein L42 (106 aa)
           
  0.441
XP_506045.1
YALI0F30327p (430 aa)
           
  0.439
set-2
YALI0E18260p; Histone methyltransferase that methylates histone H3 to form H3K36me. Involved in transcription elongation as well as in transcription repression (By similarity) (768 aa)
     
   
  0.436
HHT1
YALI0F25905p; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (By similarity) (139 aa)
       
  0.423
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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