STRINGSTRING
XP_505724.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_505724.1" - YALI0F21835p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_505724.1YALI0F21835p (482 aa)    
Predicted Functional Partners:
XP_502725.1
YALI0D12012p (686 aa)
     
        0.653
ERB1
YALI0E26389p; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (820 aa)
     
        0.651
XP_501895.1
YALI0C16203p (507 aa)
     
        0.619
DBP3
YALI0D09449p; ATP-dependent RNA helicase required for 60S ribosomal subunit synthesis. Involved in efficient pre-rRNA processing, predominantly at site A3, which is necessary for the normal formation of 25S and 5.8S rRNAs (By similarity) (532 aa)
     
      0.600
SET1
YALI0B14883p; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation (1170 aa)
       
      0.572
XP_500778.1
Ribosome biogenesis protein BRX1 (286 aa)
     
        0.546
XP_500653.1
YALI0B08756p (714 aa)
     
        0.515
XP_500372.1
YALI0B01078p (906 aa)
     
        0.513
ARX1
YALI0C05599p; Probable metalloprotease involved in proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit. Accompanies the pre-60S particles to the cytoplasm (By similarity) (484 aa)
     
        0.511
XP_505532.1
YALI0F17358p (653 aa)
     
        0.493
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
Server load: low (6%) [HD]