STRINGSTRING
XP_505798.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_505798.1" - YALI0F23683p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_505798.1YALI0F23683p (676 aa)    
Predicted Functional Partners:
XP_002142993.1
YALI0A19404p (1930 aa)
       
 
  0.858
XP_502733.1
YALI0D12210p (1041 aa)
       
 
  0.828
XP_504371.1
YALI0E24849p (585 aa)
       
 
  0.804
PAB1
YALI0C00539p; Binds the poly(A) tail of mRNA. Appears to be an important mediator of the multiple roles of the poly(A) tail in mRNA biogenesis, stability and translation. In the nucleus, involved in both mRNA cleavage and polyadenylation. Is also required for efficient mRNA export to the cytoplasm. Acts in concert with a poly(A)-specific nuclease (PAN) to affect poly(A) tail shortening, which may occur concomitantly with either nucleocytoplasmic mRNA transport or translational initiation. In the cytoplasm, stimulates translation initiation and regulates mRNA decay through translation t [...] (629 aa)
       
 
  0.768
XP_499748.1
YALI0A04279p (527 aa)
       
 
  0.758
XP_500029.1
YALI0A13101p (867 aa)
       
 
  0.757
XP_506054.1
YALI0F30525p (716 aa)
       
 
  0.708
XP_501450.1
YALI0C04620p (919 aa)
       
      0.666
XP_500158.1
YALI0A17292p (351 aa)
       
 
  0.614
XP_501722.1
YALI0C11429p (467 aa)
       
 
  0.612
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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