STRINGSTRING
XP_505862.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_505862.1" - YALI0F25267p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_505862.1YALI0F25267p (244 aa)    
Predicted Functional Partners:
XP_502894.1
YALI0D16291p (1018 aa)
     
 
  0.944
TIF6
YALI0E27940p; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export (246 aa)
   
 
  0.943
XP_505175.1
ubiquitin-60S ribosomal protein L40 fusion protein (128 aa)
       
      0.909
XP_502097.1
60S ribosomal protein L3 (387 aa)
       
      0.899
XP_505233.1
YALI0F10076p (277 aa)
       
      0.655
RPL24
60S ribosomal protein L24 (155 aa)
     
 
  0.604
XP_500870.1
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (314 aa)
       
 
  0.600
XP_505530.1
YALI0F17314p (285 aa)
       
      0.583
XP_504535.1
60S ribosomal protein L9 (188 aa)
       
 
  0.582
MEF1
YALI0D07326p; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A- site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (764 aa)
     
 
  0.569
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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