STRINGSTRING
XP_505983.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_505983.1" - YALI0F28281p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_505983.1YALI0F28281p (1097 aa)    
Predicted Functional Partners:
XP_504301.1
YALI0E23265p (366 aa)
       
  0.970
XP_500981.1
YALI0B16610p (319 aa)
       
  0.878
SEC13
YALI0F30151p; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. It also functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport factors. SEC13 is requir [...] (298 aa)
       
  0.868
XP_500185.1
YALI0A18007p (531 aa)
       
 
  0.857
XP_502168.1
YALI0C23166p (456 aa)
       
 
  0.754
XP_500434.1
YALI0B02706p (535 aa)
       
 
  0.731
XP_502119.1
YALI0C22066p (882 aa)
       
 
  0.711
XP_502878.1
YALI0D15840p (1120 aa)
       
 
  0.673
XP_505234.2
YALI0F10098p (1080 aa)
       
 
  0.630
XP_503331.1
YALI0D26752p (1287 aa)
       
 
  0.612
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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