STRINGSTRING
XP_506048.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_506048.1" - 90S preribosome/SSU processome component KRR1 in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_506048.190S preribosome/SSU processome component KRR1; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (359 aa)    
Predicted Functional Partners:
XP_502264.1
YALI0D00957p (577 aa)
     
 
  0.996
XP_505404.1
YALI0F14245p (275 aa)
     
 
  0.994
XP_500322.1
YALI0A21197p (694 aa)
     
 
  0.986
XP_502109.1
YALI0C21846p (1117 aa)
     
  0.985
NOP14
YALI0F08371p; Involved in nucleolar processing of pre-18S ribosomal RNA. Has a role in the nuclear export of 40S pre-ribosomal subunit to the cytoplasm (By similarity) (832 aa)
     
  0.985
XP_499741.1
YALI0A03905p (321 aa)
     
 
  0.982
XP_505225.1
YALI0F09856p (522 aa)
     
  0.981
ROK1
YALI0B21538p; ATP-dependent RNA helicase involved in 40S ribosomal subunit biogenesis. Required for the processing and cleavage of 35S pre-rRNA at sites A0, A1, and A2, leading to mature 18S rRNA (547 aa)
     
  0.980
XP_505656.1
YALI0F20284p (530 aa)
     
  0.978
XP_505917.1
YALI0F26653p (309 aa)
     
  0.978
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
Server load: low (7%) [HD]